TY - JOUR
T1 - Tenacibaculum halocynthiae sp. nov., a member of the family Flavobacteriaceae isolated from sea squirt Halocynthia roretzi
AU - Kim, Young Ok
AU - Park, Sooyeon
AU - Nam, Bo Hye
AU - Jung, Yong Taek
AU - Kim, Dong Gyun
AU - Jee, Young Ju
AU - Yoon, Jung Hoon
PY - 2013/6
Y1 - 2013/6
N2 - A Gram-negative, non-spore-forming, aerobic, non-flagellated, non-gliding and rod-shaped bacterial strain, designated P-R2A1-2T, was isolated from sea squirt (Halocynthia roretzi) collected from the South Sea, Korea. It grew optimally at 25-28 C, at pH 7.0-8.0 and in the presence of 2 % (w/v) NaCl. Neighbour-joining phylogenetic tree based on 16S rRNA gene sequences revealed that the strain fell within the clade comprising Tenacibaculum species. Strain P-R2A1-2T exhibited the highest 16S rRNA gene sequence similarity values of 97.6, 97.2 and 97.0 % to Tenacibaculum aestuarii SMK-4T, T. lutimaris TF-26T and T. aiptasiae a4T, respectively, and of 94.5-96.8 % to the type strains of the other Tenacibaculum species. Strain P-R2A1-2T contained MK-6 as the predominant menaquinone and C 16:1 ω7c and/or iso-C15:0 2-OH, iso-C15:0 3-OH and iso-C15:0 as the major fatty acids. The DNA G + C content of strain P-R2A1-2T was 30.7 mol % and its DNA-DNA relatedness values with the type strains of T. aestuarii, T. lutimaris and T. aiptasiae were 17 ± 4.2, 21 ± 6.1 and 16 ± 5.2 %, respectively. Differential phenotypic properties, together with the phylogenetic and genetic distinctiveness, revealed that the novel strain is separate from other Tenacibaculum species. On the basis of the data presented, strain P-R2A1-2 T is considered to represent a novel species of the genus Tenacibaculum, for which the name Tenacibaculum halocynthiae sp. nov. is proposed. The type strain is P-R2A1-2T (=KCTC 32262T = CCUG 63681T).
AB - A Gram-negative, non-spore-forming, aerobic, non-flagellated, non-gliding and rod-shaped bacterial strain, designated P-R2A1-2T, was isolated from sea squirt (Halocynthia roretzi) collected from the South Sea, Korea. It grew optimally at 25-28 C, at pH 7.0-8.0 and in the presence of 2 % (w/v) NaCl. Neighbour-joining phylogenetic tree based on 16S rRNA gene sequences revealed that the strain fell within the clade comprising Tenacibaculum species. Strain P-R2A1-2T exhibited the highest 16S rRNA gene sequence similarity values of 97.6, 97.2 and 97.0 % to Tenacibaculum aestuarii SMK-4T, T. lutimaris TF-26T and T. aiptasiae a4T, respectively, and of 94.5-96.8 % to the type strains of the other Tenacibaculum species. Strain P-R2A1-2T contained MK-6 as the predominant menaquinone and C 16:1 ω7c and/or iso-C15:0 2-OH, iso-C15:0 3-OH and iso-C15:0 as the major fatty acids. The DNA G + C content of strain P-R2A1-2T was 30.7 mol % and its DNA-DNA relatedness values with the type strains of T. aestuarii, T. lutimaris and T. aiptasiae were 17 ± 4.2, 21 ± 6.1 and 16 ± 5.2 %, respectively. Differential phenotypic properties, together with the phylogenetic and genetic distinctiveness, revealed that the novel strain is separate from other Tenacibaculum species. On the basis of the data presented, strain P-R2A1-2 T is considered to represent a novel species of the genus Tenacibaculum, for which the name Tenacibaculum halocynthiae sp. nov. is proposed. The type strain is P-R2A1-2T (=KCTC 32262T = CCUG 63681T).
KW - Novel species
KW - Polyphasic taxonomy
KW - Sea squirt (Halocynthia roretzi)
KW - Tenacibaculum halocynthiae sp. nov.
UR - https://www.scopus.com/pages/publications/84878267354
U2 - 10.1007/s10482-013-9913-5
DO - 10.1007/s10482-013-9913-5
M3 - Article
C2 - 23543245
AN - SCOPUS:84878267354
SN - 0003-6072
VL - 103
SP - 1321
EP - 1327
JO - Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology
JF - Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology
IS - 6
ER -