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Sneathiella sedimenti sp. nov., isolated from marine sediment

  • Yunjeong Lee
  • , Veeraya Weerawongwiwat
  • , Jong Hwa Kim
  • , Jung Hoon Yoon
  • , Min Kuk Suh
  • , Han Sol Kim
  • , Jung Sook Lee
  • , Ampaitip Sukhoom
  • , Wonyong Kim
  • Chung-Ang University
  • Korea Research Institute of Bioscience and Biotechnology
  • Prince of Songkla University

Research output: Contribution to journalArticlepeer-review

Abstract

A novel bacterium, designated CAU 1612T, was isolated from coastal sediment sampled in the Republic of Korea. Cells of the strain were Gram-stain-negative, rod-shaped and motile. Optimum growth occurred at 30 °C, at pH 7.0 and with 1.0% (w/v) NaCl. Based on 16S rRNA gene sequences, phylogenetic analysis revealed that strain CAU 1612T belonged to the genus Sneathiella and showed highest similarity to ‘Sneathiella litorea’ JCM 33810T (98.5%), followed by Sneathiella chungangensis KCTC 32476T (97.7%), Sneathiella aquimaris KCTC 12842T (96.0%), Sneathiella chinensis LMG 23452T (95.5%), Sneathiella limi-maris KCTC 52846T (95.5%) and Sneathiella glossodoripedis KCTC 12842T (95.4%). The average nucleotide identity and digital DNA–DNA hybridization values of strain CAU 1612T were estimated to be 68.5–81.7% and ≤23.7%, respectively, to members of the genus Sneathiella. The DNA G+C content was 54.1mol%. The major cellular fatty acids (>10%) were C16:0, C19:0 cyclo ω8c and summed feature 8 (C18:1 ω7c and/or C18:1 ω6c). The major menaquinone was Q-10 and the predominant polar lipids were phos-phatidylmethylethanolamine, phosphatidylethanolamine and phosphatidylglycerol. On the basis of taxonomic evidence, strain CAU 1612T represents a novel species, for which the name Sneathiella sedimenti sp. nov. is proposed. The type strain is CAU 1612T (=KCTC 82427T=MCCC 1K06082T).

Original languageEnglish
Article number005218
JournalInternational Journal of Systematic and Evolutionary Microbiology
Volume72
Issue number2
DOIs
StatePublished - 2022

Keywords

  • 16S rRNA gene sequence
  • Alphaproteobacteria
  • Genome sequencing
  • Marine sediment
  • Sneathiella sedimenti
  • Sneathiellaceae

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