TY - JOUR
T1 - Salinimicrobium gaetbulicola sp. nov., isolated from tidal flat sediment
AU - Lee, Soo Young
AU - Park, Sooyeon
AU - Oh, Tae Kwang
AU - Yoon, Jung Hoon
PY - 2012/5
Y1 - 2012/5
N2 - A Gram-stain-negative, aerobic, non-flagellated, non-gliding and short rod- or rod-shaped bacterial strain, designated BB-My20T, was isolated from tidal flat sediment taken from the southern coast of Korea. Strain BB-My20T grew optimally at 37 °C, at pH 7.0-7.5 and in the presence of 2% (w/v) NaCl. A phylogenetic tree based on 16S rRNA gene sequences showed that strain BB-My20T fell within the clade comprising Salinimicrobium species, joining Salinimicrobium catena HY1T, with which it had a 16S rRNA gene sequence similarity value of 97.4%. It exhibited 95.4-96.9% sequence similarity to the type strains of other members of the genus Salinimicrobium. Strain BB-My20T contained MK-6 as the predominant menaquinone and iso-C15: 0, anteiso-C15: 0 and iso-C17: 0 3-OH as the major fatty acids. The major polar lipids detected in strain BB-My20T and S. catena JCM 14015T were phosphatidylethanolamine and one unidentified lipid. The DNA G+C content of strain BB-My20T was 45.1 mol% and its mean DNA-DNA relatedness value with S. catena JCM 14015T was 4.5%. Differential phenotypic properties, together with its phylogenetic and genetic distinctiveness, revealed that strain BB-My20T can be distinguished from the four recognized species of the genus Salinimicrobium. On the basis of the data presented, strain BB-My20T is considered to represent a novel species of the genus Salinimicrobium, for which the name Salinimicrobium gaetbulicola sp. nov. is proposed; the type strain is BB-My20T (=KCTC 23579T=CCUG 60898T).
AB - A Gram-stain-negative, aerobic, non-flagellated, non-gliding and short rod- or rod-shaped bacterial strain, designated BB-My20T, was isolated from tidal flat sediment taken from the southern coast of Korea. Strain BB-My20T grew optimally at 37 °C, at pH 7.0-7.5 and in the presence of 2% (w/v) NaCl. A phylogenetic tree based on 16S rRNA gene sequences showed that strain BB-My20T fell within the clade comprising Salinimicrobium species, joining Salinimicrobium catena HY1T, with which it had a 16S rRNA gene sequence similarity value of 97.4%. It exhibited 95.4-96.9% sequence similarity to the type strains of other members of the genus Salinimicrobium. Strain BB-My20T contained MK-6 as the predominant menaquinone and iso-C15: 0, anteiso-C15: 0 and iso-C17: 0 3-OH as the major fatty acids. The major polar lipids detected in strain BB-My20T and S. catena JCM 14015T were phosphatidylethanolamine and one unidentified lipid. The DNA G+C content of strain BB-My20T was 45.1 mol% and its mean DNA-DNA relatedness value with S. catena JCM 14015T was 4.5%. Differential phenotypic properties, together with its phylogenetic and genetic distinctiveness, revealed that strain BB-My20T can be distinguished from the four recognized species of the genus Salinimicrobium. On the basis of the data presented, strain BB-My20T is considered to represent a novel species of the genus Salinimicrobium, for which the name Salinimicrobium gaetbulicola sp. nov. is proposed; the type strain is BB-My20T (=KCTC 23579T=CCUG 60898T).
UR - https://www.scopus.com/pages/publications/84860714726
U2 - 10.1099/ijs.0.033399-0
DO - 10.1099/ijs.0.033399-0
M3 - Article
C2 - 21685257
AN - SCOPUS:84860714726
SN - 1466-5026
VL - 62
SP - 1027
EP - 1031
JO - International Journal of Systematic and Evolutionary Microbiology
JF - International Journal of Systematic and Evolutionary Microbiology
IS - 5
ER -