Optimization of a multi-product microbial cell factory for multiple objectives - a paradigm for metabolic pathway recipe

Fook Choon Lee, Gade Pandu Rangaiah, Dong Yup Lee

Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

Abstract

Genetic algorithms, which have been used successfully in chemical engineering in recent years, enable us to probe deeper into the influences of alternate metabolic pathways on multi-product synthesis. In this chapter, optimization of enzyme activities in Escherichia coli for multiple objectives is proposed and explored using a detailed, non-linear dynamic model for central carbon metabolism in E. coli and a non-dominated sorting genetic algorithm for multi-objective optimization (MOO). A wide range of optimal enzyme activities regulating the amino acids synthesis is successfully obtained for selected, integrated pathway scenarios. The predicted potential improvements due to the optimized metabolic pathway recipe using the MOO strategy are highlighted and discussed in detail.

Original languageEnglish
Title of host publicationMulti-objective Optimization
Subtitle of host publicationTechniques And Applications In Chemical Engineering (With Cd-rom)
PublisherWorld Scientific Publishing Co.
Pages401-427
Number of pages27
ISBN (Electronic)9789812836526
DOIs
StatePublished - 1 Jan 2008
Externally publishedYes

Keywords

  • Metabolic pathway recipe
  • Mixed integer MOO (MIMOO)
  • Multi-product microbial cell factory
  • Pareto-optimal set

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