TY - JOUR
T1 - Nocardioides basaltis sp. nov., isolated from black beach sand
AU - Kim, Kyoung Ho
AU - Roh, Seong Woon
AU - Chang, Ho Won
AU - Nam, Young Do
AU - Yoon, Jung Hoon
AU - Jeon, Che Ok
AU - Oh, Hee Mock
AU - Bae, Jin Woo
PY - 2009
Y1 - 2009
N2 - A novel Gram-positive, aerobic, short-rod-shaped bacterium, designated strain J112T, was isolated from black sand collected from Soesoggak, Jeju Island, Korea. The strain was found to be oxidase-negative and catalase-positive. Cells grew at 10-37 °C, at pH 5.5-8.0 and with 1-10% NaCl. Growth occurred on marine agar but not on R2A or trypticase soy agar. A phylogenetic analysis based on 16S rRNA gene sequences showed that the strain belongs to the radiation of the genus Nocardioides. Strain J112T shared the highest 16S rRNA gene sequence similarities with Nocardioides marinisabuli SBS-12T (99.2%), Nocardioides terrigena DS-17T (97.3%), Nocardioides kribbensis KCTC 19038T (97.1%) and type strains of other Nocardioides species with validly published names (<97%). The DNA-DNA hybridization values between strain J112T and the three most closely related strains were low enough to justify the assignment of this strain to a novel species. On the basis of these phenotypic, phylogenetic and chemotaxonomic data, strain J112T represents a novel species of the genus Nocardioides, for which the name Nocardioides basaltis sp. nov. is proposed. The type strain is J112T (=KCTC 19365T=JCM 14945T).
AB - A novel Gram-positive, aerobic, short-rod-shaped bacterium, designated strain J112T, was isolated from black sand collected from Soesoggak, Jeju Island, Korea. The strain was found to be oxidase-negative and catalase-positive. Cells grew at 10-37 °C, at pH 5.5-8.0 and with 1-10% NaCl. Growth occurred on marine agar but not on R2A or trypticase soy agar. A phylogenetic analysis based on 16S rRNA gene sequences showed that the strain belongs to the radiation of the genus Nocardioides. Strain J112T shared the highest 16S rRNA gene sequence similarities with Nocardioides marinisabuli SBS-12T (99.2%), Nocardioides terrigena DS-17T (97.3%), Nocardioides kribbensis KCTC 19038T (97.1%) and type strains of other Nocardioides species with validly published names (<97%). The DNA-DNA hybridization values between strain J112T and the three most closely related strains were low enough to justify the assignment of this strain to a novel species. On the basis of these phenotypic, phylogenetic and chemotaxonomic data, strain J112T represents a novel species of the genus Nocardioides, for which the name Nocardioides basaltis sp. nov. is proposed. The type strain is J112T (=KCTC 19365T=JCM 14945T).
UR - https://www.scopus.com/pages/publications/60549098506
U2 - 10.1099/ijs.0.65785-0
DO - 10.1099/ijs.0.65785-0
M3 - Article
C2 - 19126721
AN - SCOPUS:60549098506
SN - 1466-5026
VL - 59
SP - 42
EP - 47
JO - International Journal of Systematic and Evolutionary Microbiology
JF - International Journal of Systematic and Evolutionary Microbiology
IS - 1
ER -