Growth and detachment of 5 helix DNA ribbons

Saima Bashar, Si Un Hwang, Junwye Lee, Rashid Amin, Sreekantha Reddy Dugasani, Tai Hwan Ha, Sung Ha Park

Research output: Contribution to journalArticlepeer-review

Abstract

We report on the concentration-dependent surface-assisted growth and time-temperature-dependent detachment of one-dimensional 5 helix DNA ribbons (5HR) on a mica substrate. The growth coverage ratio was determined by varying the concentration of the 5HR strands in a test tube, and the detachment rate of 5HR on mica was determined by varying the incubation time at a fixed temperature on a heat block. The topological changes in the concentration-dependent attachment and the time-temperature-dependent detachment for 5HR on mica were observed via atomic force microscopy. The observations indicate that 5HR started to grow on mica at ∼10 nM and provided full coverage at ∼50 nM. In contrast, 5HR at 65°C started to detach from mica after 5 min and was completely removed after 10 min. The growth and detachment coverage show a sinusoidal variation in the growth ratio and a linear variation with a rate of detachment of 20%/min, respectively. The physical parameters that control the stability of the DNA structures on a given substrate should be studied to successfully integrate DNA structures for physical and chemical applications.

Original languageEnglish
Pages (from-to)4126-4130
Number of pages5
JournalJournal of Nanoscience and Nanotechnology
Volume16
Issue number4
DOIs
StatePublished - 1 Apr 2016
Externally publishedYes

Keywords

  • Coverage
  • Detachment
  • DNA
  • Mica
  • Self-assembly
  • Surface-assisted growth

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