Comprehensive Characterization of Oncogenic Drivers in Asian Lung Adenocarcinoma

  • Shiyong Li
  • , Yoon La Choi
  • , Zhuolin Gong
  • , Xiao Liu
  • , Maruja Lira
  • , Zhengyan Kan
  • , Ensel Oh
  • , Jian Wang
  • , Jason C. Ting
  • , Xiangsheng Ye
  • , Christoph Reinhart
  • , Xiaoqiao Liu
  • , Yunfei Pei
  • , Wei Zhou
  • , Ronghua Chen
  • , Shijun Fu
  • , Gang Jin
  • , Awei Jiang
  • , Julio Fernandez
  • , James Hardwick
  • Min Woong Kang, I. Hoseok, Hancheng Zheng, Jhingook Kim, Mao Mao

Research output: Contribution to journalArticlepeer-review

86 Scopus citations

Abstract

Introduction The incidence rate of lung adenocarcinoma (LUAD), the predominant histological subtype of lung cancer, is elevated in Asians, particularly in female nonsmokers. The mutation patterns in LUAD in Asians might be distinct from those in LUAD in whites. Methods We profiled 271 resected LUAD tumors (mainly stage I) to characterize the genomic landscape of LUAD in Asians with a focus on female nonsmokers. Results Mutations in EGFR, KRAS, erb-b2 receptor tyrosine kinase 2 gene (ERBB2), and BRAF; gene fusions involving anaplastic lymphoma receptor tyrosine kinase gene (ALK), ROS1, and ret proto-oncogene (RET); and Met Proto-Oncogene Tyrosine Kinase (MET) exon 14 skipping were the major drivers in LUAD in Asians, exhibiting mutually exclusive and differing prevalence from those reported in studies of LUAD in non-Asians. In addition, we identified a novel mutational signature of XNX (the mutated base N in the middle flanked by two identical bases at the 5′ and 3′ positions) that was overrepresented in LUAD tumors in nonsmokers and negatively correlated with the overall mutational frequency. Conclusions In this cohort, approximately 85% of individuals have known driver mutations (EGFR 59.4%, KRAS 7.4%, ALK 7.4%, ERBB2 2.6%, ROS1 2.2%, RET 2.2%, MET 1.8%, BRAF 1.1%, and NRAS 0.4%). Seventy percent of smokers and 90% of nonsmokers had defined oncogenic drivers matching the U.S. Food and Drug Administration-approved targeted therapies.

Original languageEnglish
Pages (from-to)2129-2140
Number of pages12
JournalJournal of Thoracic Oncology
Volume11
Issue number12
DOIs
StatePublished - 2016

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

Keywords

  • Adenocarcinoma
  • Asian
  • Driver genes
  • Lung cancer

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