Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea

Jin Suk Youn; Ji Young Yang; Seung Chul Kim; Jae Hong Pak

doi:10.1080/23802359.2019.1660274

Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea

Jin Suk Youn, Ji Young Yang, Seung Chul Kim, Jae Hong Pak

Department of Biological Sciences

Kyungpook National University

Research output: Contribution to journal › Article › peer-review

1 Scopus citations

Abstract

We reported the complete chloroplast genome sequence of Rumex japonicus in Dok-do Island, Korea. The genome size was 159,223 bp in total length with one large single-copy (LSC; 84,962 bp), one small single-copy (SSC; 12,999 bp), and 2 inverted repeat (IR) regions (IR_a and IR_b, each with 30,631 bp). The overall GC content was 37.5% and the genome contained 131 genes, including 83 protein-coding, 38 transfer RNA and 8 ribosomal RNA genes. Phylogenetic analysis supported monophyly of subgenus Rumex and determined the phylogenetic position of R. japonicus as sister to the clade containing R. crispus and R. nepalensis.

Original language	English
Pages (from-to)	2892-2893
Number of pages	2
Journal	Mitochondrial DNA Part B: Resources
Volume	4
Issue number	2
DOIs	https://doi.org/10.1080/23802359.2019.1660274
State	Published - 3 Jul 2019

Keywords

Chloroplast genome
Dok-do Island
Polygonaceae
Rumex japonicus

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10.1080/23802359.2019.1660274

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title = "Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea",

abstract = "We reported the complete chloroplast genome sequence of Rumex japonicus in Dok-do Island, Korea. The genome size was 159,223 bp in total length with one large single-copy (LSC; 84,962 bp), one small single-copy (SSC; 12,999 bp), and 2 inverted repeat (IR) regions (IRa and IRb, each with 30,631 bp). The overall GC content was 37.5\% and the genome contained 131 genes, including 83 protein-coding, 38 transfer RNA and 8 ribosomal RNA genes. Phylogenetic analysis supported monophyly of subgenus Rumex and determined the phylogenetic position of R. japonicus as sister to the clade containing R. crispus and R. nepalensis.",

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year = "2019",

month = jul,

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doi = "10.1080/23802359.2019.1660274",

language = "English",

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TY - JOUR

T1 - Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea

AU - Youn, Jin Suk

AU - Yang, Ji Young

AU - Kim, Seung Chul

AU - Pak, Jae Hong

PY - 2019/7/3

Y1 - 2019/7/3

N2 - We reported the complete chloroplast genome sequence of Rumex japonicus in Dok-do Island, Korea. The genome size was 159,223 bp in total length with one large single-copy (LSC; 84,962 bp), one small single-copy (SSC; 12,999 bp), and 2 inverted repeat (IR) regions (IRa and IRb, each with 30,631 bp). The overall GC content was 37.5% and the genome contained 131 genes, including 83 protein-coding, 38 transfer RNA and 8 ribosomal RNA genes. Phylogenetic analysis supported monophyly of subgenus Rumex and determined the phylogenetic position of R. japonicus as sister to the clade containing R. crispus and R. nepalensis.

AB - We reported the complete chloroplast genome sequence of Rumex japonicus in Dok-do Island, Korea. The genome size was 159,223 bp in total length with one large single-copy (LSC; 84,962 bp), one small single-copy (SSC; 12,999 bp), and 2 inverted repeat (IR) regions (IRa and IRb, each with 30,631 bp). The overall GC content was 37.5% and the genome contained 131 genes, including 83 protein-coding, 38 transfer RNA and 8 ribosomal RNA genes. Phylogenetic analysis supported monophyly of subgenus Rumex and determined the phylogenetic position of R. japonicus as sister to the clade containing R. crispus and R. nepalensis.

KW - Chloroplast genome

KW - Dok-do Island

KW - Polygonaceae

KW - Rumex japonicus

UR - https://www.scopus.com/pages/publications/85071653575

U2 - 10.1080/23802359.2019.1660274

DO - 10.1080/23802359.2019.1660274

M3 - Article

AN - SCOPUS:85071653575

SN - 2380-2359

VL - 4

SP - 2892

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JO - Mitochondrial DNA Part B: Resources

JF - Mitochondrial DNA Part B: Resources

IS - 2

ER -

Complete plastome sequence of Rumex japonicus (Polygonaceae) in Dok-do Island, Korea

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Keywords

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