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Bayesian Optimal Two-Sample Tests for High-Dimensional Gaussian Populations

  • Kyoungjae Lee
  • , Kisung You
  • , Lizhen Lin
  • Yale University
  • University of Notre Dame

Research output: Contribution to journalArticlepeer-review

Abstract

We propose minimax optimal Bayesian two-sample tests for testing equality of high-dimensional mean vectors and covariance matrices between two populations. In many applications including genomics and medical imaging, it is natural to assume that only a few entries of two mean vectors or covariance matrices are different. Many existing tests that rely on aggregating the difference between empirical means or covariance matrices are not optimal or yield low power under such setups. Motivated by this, we develop Bayesian two-sample tests employing a divide-and-conquer idea, which is powerful especially when the differences between two populations are rare but large. The proposed two-sample tests manifest closed forms of Bayes factors and allow scalable computations even in high-dimensions. We prove that the proposed tests are consistent under relatively mild conditions compared to existing tests in the literature. Furthermore, the testable regions from the proposed tests turn out to be minimax optimal in terms of rates. Simulation studies show clear advantages of the proposed tests over other state-of-the-art methods in various scenarios. Our tests are also applied to the analysis of the gene expression data of two cancer data sets.

Original languageEnglish
Pages (from-to)869-893
Number of pages25
JournalBayesian Analysis
Volume19
Issue number3
DOIs
StatePublished - 2024

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

Keywords

  • Bayes factor consistency
  • Bayesian hypothesis test
  • high-dimensional covariance matrix
  • optimal high-dimensional tests

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