Aliihoeflea aestuarii gen. nov., sp. nov., a novel bacterium isolated from tidal flat sediment

Seong Woon Roh; Kyoung Ho Kim; Young Do Nam; Ho Won Chang; Min Soo Kim; Kee Sun Shin; Jung Hoon Yoon; Hee Mock Oh; Jin Woo Bae

doi:10.1007/s12275-008-0196-x

Aliihoeflea aestuarii gen. nov., sp. nov., a novel bacterium isolated from tidal flat sediment

Seong Woon Roh
, Kyoung Ho Kim
, Young Do Nam
, Ho Won Chang
, Min Soo Kim
, Kee Sun Shin
, Jung Hoon Yoon
, Hee Mock Oh
, Jin Woo Bae

University of Science and Technology UST
Korea Research Institute of Bioscience and Biotechnology
Gyeongsang National University

Research output: Contribution to journal › Article › peer-review

20 Scopus citations

Abstract

A novel Gram-negative and rod-shaped bacterium, designated N8^T, was isolated from tidal flat sediment. Phylogenetic analysis based on 16S rRNA gene sequences showed that N8^T strain is associated with the family Phyllobacteriaceae: two uncultured clones (98.4 and 99.8% 16S rRNA gene sequence similarity) and the genus Mesorhizobium (≤97.0%). The novel strain formed a separate clade with uncultured clones in the phylogenetic tree based on 16S rRNA gene sequences. Cellular fatty acid profiles predominately comprised C _18:1 ω7c and C_19:0 cyclo ω8c. The major isoprenoid quinone is ubiquinone-10 and genomic DNA G+C content is 53.4 mol%. The polyphasic taxonomic study indicates that the novel strain N8^T represents a novel species of the new genus in the family Phyllobacteriaceae, named Aliihoeflea aestuarii. The type strain is N8^T (= KCTC 22052^T= JCM 15118^T= DSM 19536^T).

Original language	English
Pages (from-to)	594-598
Number of pages	5
Journal	Journal of Microbiology
Volume	46
Issue number	5
DOIs	https://doi.org/10.1007/s12275-008-0196-x
State	Published - Oct 2008
Externally published	Yes

Keywords

Aliihoeflea aestuarii gen. nov.
sp. nov.
Taxonomy

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10.1007/s12275-008-0196-x

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@article{3af01030db0a42b7aa56e41f5f5bc507,

title = "Aliihoeflea aestuarii gen. nov., sp. nov., a novel bacterium isolated from tidal flat sediment",

abstract = "A novel Gram-negative and rod-shaped bacterium, designated N8T, was isolated from tidal flat sediment. Phylogenetic analysis based on 16S rRNA gene sequences showed that N8T strain is associated with the family Phyllobacteriaceae: two uncultured clones (98.4 and 99.8\% 16S rRNA gene sequence similarity) and the genus Mesorhizobium (≤97.0\%). The novel strain formed a separate clade with uncultured clones in the phylogenetic tree based on 16S rRNA gene sequences. Cellular fatty acid profiles predominately comprised C 18:1 ω7c and C19:0 cyclo ω8c. The major isoprenoid quinone is ubiquinone-10 and genomic DNA G+C content is 53.4 mol\%. The polyphasic taxonomic study indicates that the novel strain N8T represents a novel species of the new genus in the family Phyllobacteriaceae, named Aliihoeflea aestuarii. The type strain is N8T (= KCTC 22052T= JCM 15118T= DSM 19536T).",

keywords = "Aliihoeflea aestuarii gen. nov., sp. nov., Taxonomy",

author = "Roh, \{Seong Woon\} and Kim, \{Kyoung Ho\} and Nam, \{Young Do\} and Chang, \{Ho Won\} and Kim, \{Min Soo\} and Shin, \{Kee Sun\} and Yoon, \{Jung Hoon\} and Oh, \{Hee Mock\} and Bae, \{Jin Woo\}",

year = "2008",

month = oct,

doi = "10.1007/s12275-008-0196-x",

language = "English",

volume = "46",

pages = "594--598",

journal = "Journal of Microbiology",

issn = "1225-8873",

publisher = "Microbiological Society of Korea",

number = "5",

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TY - JOUR

T1 - Aliihoeflea aestuarii gen. nov., sp. nov., a novel bacterium isolated from tidal flat sediment

AU - Roh, Seong Woon

AU - Kim, Kyoung Ho

AU - Nam, Young Do

AU - Chang, Ho Won

AU - Kim, Min Soo

AU - Shin, Kee Sun

AU - Yoon, Jung Hoon

AU - Oh, Hee Mock

AU - Bae, Jin Woo

PY - 2008/10

Y1 - 2008/10

N2 - A novel Gram-negative and rod-shaped bacterium, designated N8T, was isolated from tidal flat sediment. Phylogenetic analysis based on 16S rRNA gene sequences showed that N8T strain is associated with the family Phyllobacteriaceae: two uncultured clones (98.4 and 99.8% 16S rRNA gene sequence similarity) and the genus Mesorhizobium (≤97.0%). The novel strain formed a separate clade with uncultured clones in the phylogenetic tree based on 16S rRNA gene sequences. Cellular fatty acid profiles predominately comprised C 18:1 ω7c and C19:0 cyclo ω8c. The major isoprenoid quinone is ubiquinone-10 and genomic DNA G+C content is 53.4 mol%. The polyphasic taxonomic study indicates that the novel strain N8T represents a novel species of the new genus in the family Phyllobacteriaceae, named Aliihoeflea aestuarii. The type strain is N8T (= KCTC 22052T= JCM 15118T= DSM 19536T).

AB - A novel Gram-negative and rod-shaped bacterium, designated N8T, was isolated from tidal flat sediment. Phylogenetic analysis based on 16S rRNA gene sequences showed that N8T strain is associated with the family Phyllobacteriaceae: two uncultured clones (98.4 and 99.8% 16S rRNA gene sequence similarity) and the genus Mesorhizobium (≤97.0%). The novel strain formed a separate clade with uncultured clones in the phylogenetic tree based on 16S rRNA gene sequences. Cellular fatty acid profiles predominately comprised C 18:1 ω7c and C19:0 cyclo ω8c. The major isoprenoid quinone is ubiquinone-10 and genomic DNA G+C content is 53.4 mol%. The polyphasic taxonomic study indicates that the novel strain N8T represents a novel species of the new genus in the family Phyllobacteriaceae, named Aliihoeflea aestuarii. The type strain is N8T (= KCTC 22052T= JCM 15118T= DSM 19536T).

KW - Aliihoeflea aestuarii gen. nov.

KW - sp. nov.

KW - Taxonomy

UR - https://www.scopus.com/pages/publications/55949130316

U2 - 10.1007/s12275-008-0196-x

DO - 10.1007/s12275-008-0196-x

M3 - Article

C2 - 18974964

AN - SCOPUS:55949130316

SN - 1225-8873

VL - 46

SP - 594

EP - 598

JO - Journal of Microbiology

JF - Journal of Microbiology

IS - 5

ER -

Aliihoeflea aestuarii gen. nov., sp. nov., a novel bacterium isolated from tidal flat sediment

Abstract

Keywords

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