Aliihoeflea aestuarii gen. nov., sp. nov., a novel bacterium isolated from tidal flat sediment

Seong Woon Roh; Kyoung Ho Kim; Young Do Nam; Ho Won Chang; Min Soo Kim; Kee Sun Shin; Jung Hoon Yoon; Hee Mock Oh; Jin Woo Bae

doi:10.1007/s12275-008-0196-x

Aliihoeflea aestuarii gen. nov., sp. nov., a novel bacterium isolated from tidal flat sediment

Seong Woon Roh, Kyoung Ho Kim, Young Do Nam, Ho Won Chang, Min Soo Kim, Kee Sun Shin, Jung Hoon Yoon, Hee Mock Oh, Jin Woo Bae

Research output: Contribution to journal › Article › peer-review

18 Scopus citations

Abstract

A novel Gram-negative and rod-shaped bacterium, designated N8^T, was isolated from tidal flat sediment. Phylogenetic analysis based on 16S rRNA gene sequences showed that N8^T strain is associated with the family Phyllobacteriaceae: two uncultured clones (98.4 and 99.8% 16S rRNA gene sequence similarity) and the genus Mesorhizobium (≤97.0%). The novel strain formed a separate clade with uncultured clones in the phylogenetic tree based on 16S rRNA gene sequences. Cellular fatty acid profiles predominately comprised C _18:1 ω7c and C_19:0 cyclo ω8c. The major isoprenoid quinone is ubiquinone-10 and genomic DNA G+C content is 53.4 mol%. The polyphasic taxonomic study indicates that the novel strain N8^T represents a novel species of the new genus in the family Phyllobacteriaceae, named Aliihoeflea aestuarii. The type strain is N8^T (= KCTC 22052^T= JCM 15118^T= DSM 19536^T).

Original language	English
Pages (from-to)	594-598
Number of pages	5
Journal	Journal of Microbiology
Volume	46
Issue number	5
DOIs	https://doi.org/10.1007/s12275-008-0196-x
State	Published - Oct 2008
Externally published	Yes

Keywords

Aliihoeflea aestuarii gen. nov.
sp. nov.
Taxonomy

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10.1007/s12275-008-0196-x

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title = "Aliihoeflea aestuarii gen. nov., sp. nov., a novel bacterium isolated from tidal flat sediment",

abstract = "A novel Gram-negative and rod-shaped bacterium, designated N8T, was isolated from tidal flat sediment. Phylogenetic analysis based on 16S rRNA gene sequences showed that N8T strain is associated with the family Phyllobacteriaceae: two uncultured clones (98.4 and 99.8\% 16S rRNA gene sequence similarity) and the genus Mesorhizobium (≤97.0\%). The novel strain formed a separate clade with uncultured clones in the phylogenetic tree based on 16S rRNA gene sequences. Cellular fatty acid profiles predominately comprised C 18:1 ω7c and C19:0 cyclo ω8c. The major isoprenoid quinone is ubiquinone-10 and genomic DNA G+C content is 53.4 mol\%. The polyphasic taxonomic study indicates that the novel strain N8T represents a novel species of the new genus in the family Phyllobacteriaceae, named Aliihoeflea aestuarii. The type strain is N8T (= KCTC 22052T= JCM 15118T= DSM 19536T).",

keywords = "Aliihoeflea aestuarii gen. nov., sp. nov., Taxonomy",

author = "Roh, \{Seong Woon\} and Kim, \{Kyoung Ho\} and Nam, \{Young Do\} and Chang, \{Ho Won\} and Kim, \{Min Soo\} and Shin, \{Kee Sun\} and Yoon, \{Jung Hoon\} and Oh, \{Hee Mock\} and Bae, \{Jin Woo\}",

year = "2008",

month = oct,

doi = "10.1007/s12275-008-0196-x",

language = "English",

volume = "46",

pages = "594--598",

journal = "Journal of Microbiology",

issn = "1225-8873",

publisher = "Springer Nature",

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T1 - Aliihoeflea aestuarii gen. nov., sp. nov., a novel bacterium isolated from tidal flat sediment

AU - Roh, Seong Woon

AU - Kim, Kyoung Ho

AU - Nam, Young Do

AU - Chang, Ho Won

AU - Kim, Min Soo

AU - Shin, Kee Sun

AU - Yoon, Jung Hoon

AU - Oh, Hee Mock

AU - Bae, Jin Woo

PY - 2008/10

Y1 - 2008/10

N2 - A novel Gram-negative and rod-shaped bacterium, designated N8T, was isolated from tidal flat sediment. Phylogenetic analysis based on 16S rRNA gene sequences showed that N8T strain is associated with the family Phyllobacteriaceae: two uncultured clones (98.4 and 99.8% 16S rRNA gene sequence similarity) and the genus Mesorhizobium (≤97.0%). The novel strain formed a separate clade with uncultured clones in the phylogenetic tree based on 16S rRNA gene sequences. Cellular fatty acid profiles predominately comprised C 18:1 ω7c and C19:0 cyclo ω8c. The major isoprenoid quinone is ubiquinone-10 and genomic DNA G+C content is 53.4 mol%. The polyphasic taxonomic study indicates that the novel strain N8T represents a novel species of the new genus in the family Phyllobacteriaceae, named Aliihoeflea aestuarii. The type strain is N8T (= KCTC 22052T= JCM 15118T= DSM 19536T).

AB - A novel Gram-negative and rod-shaped bacterium, designated N8T, was isolated from tidal flat sediment. Phylogenetic analysis based on 16S rRNA gene sequences showed that N8T strain is associated with the family Phyllobacteriaceae: two uncultured clones (98.4 and 99.8% 16S rRNA gene sequence similarity) and the genus Mesorhizobium (≤97.0%). The novel strain formed a separate clade with uncultured clones in the phylogenetic tree based on 16S rRNA gene sequences. Cellular fatty acid profiles predominately comprised C 18:1 ω7c and C19:0 cyclo ω8c. The major isoprenoid quinone is ubiquinone-10 and genomic DNA G+C content is 53.4 mol%. The polyphasic taxonomic study indicates that the novel strain N8T represents a novel species of the new genus in the family Phyllobacteriaceae, named Aliihoeflea aestuarii. The type strain is N8T (= KCTC 22052T= JCM 15118T= DSM 19536T).

KW - Aliihoeflea aestuarii gen. nov.

KW - sp. nov.

KW - Taxonomy

UR - https://www.scopus.com/pages/publications/55949130316

U2 - 10.1007/s12275-008-0196-x

DO - 10.1007/s12275-008-0196-x

M3 - Article

C2 - 18974964

AN - SCOPUS:55949130316

SN - 1225-8873

VL - 46

SP - 594

EP - 598

JO - Journal of Microbiology

JF - Journal of Microbiology

IS - 5

ER -

Aliihoeflea aestuarii gen. nov., sp. nov., a novel bacterium isolated from tidal flat sediment

Abstract

Keywords

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